Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Kcnu1O54982 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kcnu1O54982 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kcnu1O54982 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kcnu1O54982 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
Kcnu1O54982 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.45■□□□□ 0.7
Kcnu1O54982 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.45■□□□□ 0.7
Kcnu1O54982 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Kcnu1O54982 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnu1O54982 Tgds-204ENSMUST00000228543 1594 ntBASIC19.44■□□□□ 0.7
Kcnu1O54982 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Kcnu1O54982 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Kcnu1O54982 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.44■□□□□ 0.7
Kcnu1O54982 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnu1O54982 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.43■□□□□ 0.7
Kcnu1O54982 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.43■□□□□ 0.7
Kcnu1O54982 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Kcnu1O54982 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnu1O54982 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Kcnu1O54982 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.42■□□□□ 0.7
Kcnu1O54982 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Gm18284-201ENSMUST00000172604 624 ntBASIC19.42■□□□□ 0.7
Kcnu1O54982 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Kcnu1O54982 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.42■□□□□ 0.7
Kcnu1O54982 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnu1O54982 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Kcnu1O54982 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Kcnu1O54982 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Kcnu1O54982 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Kcnu1O54982 Gm10849-201ENSMUST00000100397 618 ntBASIC19.41■□□□□ 0.7
Kcnu1O54982 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Kcnu1O54982 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnu1O54982 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Kcnu1O54982 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnu1O54982 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnu1O54982 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnu1O54982 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Kcnu1O54982 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Kcnu1O54982 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.4■□□□□ 0.7
Kcnu1O54982 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Kcnu1O54982 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.4■□□□□ 0.7
Kcnu1O54982 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnu1O54982 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Kcnu1O54982 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Kcnu1O54982 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kcnu1O54982 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Kcnu1O54982 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Kcnu1O54982 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.39■□□□□ 0.69
Kcnu1O54982 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kcnu1O54982 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Kcnu1O54982 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kcnu1O54982 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.39■□□□□ 0.69
Kcnu1O54982 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.39■□□□□ 0.69
Kcnu1O54982 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Kcnu1O54982 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Kcnu1O54982 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.38■□□□□ 0.69
Kcnu1O54982 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms