Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.42■□□□□ 0.54
ChkaO54804 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.42■□□□□ 0.54
ChkaO54804 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.42■□□□□ 0.54
ChkaO54804 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ChkaO54804 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ChkaO54804 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ChkaO54804 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
ChkaO54804 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ChkaO54804 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
ChkaO54804 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ChkaO54804 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.41■□□□□ 0.54
ChkaO54804 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ChkaO54804 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ChkaO54804 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
ChkaO54804 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ChkaO54804 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.39■□□□□ 0.54
ChkaO54804 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ChkaO54804 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ChkaO54804 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ChkaO54804 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ChkaO54804 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ChkaO54804 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ChkaO54804 Gm6420-201ENSMUST00000193885 723 ntBASIC18.39■□□□□ 0.53
ChkaO54804 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.39■□□□□ 0.53
ChkaO54804 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.39■□□□□ 0.53
ChkaO54804 Gm42778-201ENSMUST00000199644 553 ntBASIC18.39■□□□□ 0.53
ChkaO54804 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.39■□□□□ 0.53
ChkaO54804 Gm10493-201ENSMUST00000097270 612 ntBASIC18.39■□□□□ 0.53
ChkaO54804 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ChkaO54804 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ChkaO54804 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ChkaO54804 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ChkaO54804 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.39■□□□□ 0.53
ChkaO54804 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.38■□□□□ 0.53
ChkaO54804 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Nespas-201ENSMUST00000143738 1083 ntBASIC18.38■□□□□ 0.53
ChkaO54804 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.38■□□□□ 0.53
ChkaO54804 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Tgds-204ENSMUST00000228543 1594 ntBASIC18.38■□□□□ 0.53
ChkaO54804 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ChkaO54804 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ChkaO54804 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.37■□□□□ 0.53
ChkaO54804 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ChkaO54804 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ChkaO54804 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.36■□□□□ 0.53
ChkaO54804 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.36■□□□□ 0.53
ChkaO54804 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.36■□□□□ 0.53
ChkaO54804 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.36■□□□□ 0.53
ChkaO54804 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms