Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk2O35491 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk2O35491 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk2O35491 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk2O35491 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk2O35491 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk2O35491 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clk2O35491 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clk2O35491 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.89■□□□□ 0.77
Clk2O35491 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.89■□□□□ 0.77
Clk2O35491 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.89■□□□□ 0.77
Clk2O35491 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.89■□□□□ 0.77
Clk2O35491 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk2O35491 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk2O35491 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk2O35491 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk2O35491 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk2O35491 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk2O35491 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Clk2O35491 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Clk2O35491 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk2O35491 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.88■□□□□ 0.77
Clk2O35491 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.87■□□□□ 0.77
Clk2O35491 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.87■□□□□ 0.77
Clk2O35491 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk2O35491 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clk2O35491 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.86■□□□□ 0.77
Clk2O35491 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clk2O35491 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.85■□□□□ 0.77
Clk2O35491 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk2O35491 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk2O35491 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk2O35491 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk2O35491 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk2O35491 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.85■□□□□ 0.77
Clk2O35491 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clk2O35491 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Gm15375-201ENSMUST00000119510 849 ntBASIC19.84■□□□□ 0.77
Clk2O35491 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.84■□□□□ 0.77
Clk2O35491 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.84■□□□□ 0.77
Clk2O35491 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk2O35491 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk2O35491 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk2O35491 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.83■□□□□ 0.77
Clk2O35491 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Clk2O35491 Gm6576-201ENSMUST00000169678 883 ntBASIC19.83■□□□□ 0.77
Clk2O35491 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk2O35491 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.83■□□□□ 0.76
Clk2O35491 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.83■□□□□ 0.76
Clk2O35491 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Clk2O35491 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.83■□□□□ 0.76
Clk2O35491 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk2O35491 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.83■□□□□ 0.76
Clk2O35491 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clk2O35491 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Clk2O35491 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Clk2O35491 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Clk2O35491 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk2O35491 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk2O35491 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.82■□□□□ 0.76
Clk2O35491 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clk2O35491 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clk2O35491 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms