Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Efnb3O35393 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Spcs1-204ENSMUST00000226782 949 ntBASIC14.42□□□□□ -0.1
Efnb3O35393 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.42□□□□□ -0.1
Efnb3O35393 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Efnb3O35393 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.41□□□□□ -0.1
Efnb3O35393 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Efnb3O35393 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.41□□□□□ -0.1
Efnb3O35393 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.41□□□□□ -0.1
Efnb3O35393 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.41□□□□□ -0.1
Efnb3O35393 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.41□□□□□ -0.1
Efnb3O35393 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.41□□□□□ -0.1
Efnb3O35393 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Efnb3O35393 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.4□□□□□ -0.1
Efnb3O35393 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Efnb3O35393 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Efnb3O35393 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Efnb3O35393 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.4□□□□□ -0.1
Efnb3O35393 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.4□□□□□ -0.1
Efnb3O35393 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.4□□□□□ -0.1
Efnb3O35393 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.4□□□□□ -0.1
Efnb3O35393 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.4□□□□□ -0.1
Efnb3O35393 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Efnb3O35393 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Efnb3O35393 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.4□□□□□ -0.1
Efnb3O35393 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Efnb3O35393 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Efnb3O35393 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.39□□□□□ -0.11
Efnb3O35393 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.39□□□□□ -0.11
Efnb3O35393 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Efnb3O35393 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Efnb3O35393 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.39□□□□□ -0.11
Efnb3O35393 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.39□□□□□ -0.11
Efnb3O35393 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Efnb3O35393 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.38□□□□□ -0.11
Efnb3O35393 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Efnb3O35393 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.38□□□□□ -0.11
Efnb3O35393 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.38□□□□□ -0.11
Efnb3O35393 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.38□□□□□ -0.11
Efnb3O35393 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Efnb3O35393 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms