Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.13■□□□□ 0.33
Cx3cl1O35188 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.13■□□□□ 0.33
Cx3cl1O35188 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cl1O35188 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.12■□□□□ 0.33
Cx3cl1O35188 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Gm26524-201ENSMUST00000192339 390 ntBASIC17.12■□□□□ 0.33
Cx3cl1O35188 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.12■□□□□ 0.33
Cx3cl1O35188 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.12■□□□□ 0.33
Cx3cl1O35188 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cx3cl1O35188 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Gm4968-201ENSMUST00000071458 858 ntBASIC17.11■□□□□ 0.33
Cx3cl1O35188 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cl1O35188 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.11■□□□□ 0.33
Cx3cl1O35188 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Rab3c-203ENSMUST00000224180 967 ntBASIC17.1■□□□□ 0.33
Cx3cl1O35188 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.1■□□□□ 0.33
Cx3cl1O35188 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cl1O35188 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cx3cl1O35188 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.09■□□□□ 0.33
Cx3cl1O35188 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cx3cl1O35188 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cl1O35188 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cl1O35188 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cl1O35188 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cx3cl1O35188 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cl1O35188 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cx3cl1O35188 Gm12441-201ENSMUST00000121806 588 ntBASIC17.08■□□□□ 0.32
Cx3cl1O35188 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms