Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx4O35137 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.28■□□□□ 0.2
Alx4O35137 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx4O35137 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx4O35137 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx4O35137 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
Alx4O35137 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Alx4O35137 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Alx4O35137 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Alx4O35137 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Alx4O35137 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Alx4O35137 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx4O35137 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Alx4O35137 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.27■□□□□ 0.19
Alx4O35137 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx4O35137 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Alx4O35137 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Alx4O35137 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx4O35137 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.27■□□□□ 0.19
Alx4O35137 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx4O35137 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Alx4O35137 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Alx4O35137 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.26■□□□□ 0.19
Alx4O35137 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.26■□□□□ 0.19
Alx4O35137 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Gm21956-201ENSMUST00000179946 522 ntBASIC16.26■□□□□ 0.19
Alx4O35137 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.26■□□□□ 0.19
Alx4O35137 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Alx4O35137 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Alx4O35137 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Alx4O35137 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.26■□□□□ 0.19
Alx4O35137 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx4O35137 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Alx4O35137 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Alx4O35137 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.25■□□□□ 0.19
Alx4O35137 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.25■□□□□ 0.19
Alx4O35137 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Alx4O35137 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx4O35137 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Alx4O35137 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.24■□□□□ 0.19
Alx4O35137 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Alx4O35137 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.24■□□□□ 0.19
Alx4O35137 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.24■□□□□ 0.19
Alx4O35137 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.24■□□□□ 0.19
Alx4O35137 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alx4O35137 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Alx4O35137 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.24■□□□□ 0.19
Alx4O35137 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx4O35137 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Alx4O35137 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Alx4O35137 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.23■□□□□ 0.19
Alx4O35137 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Gm26833-201ENSMUST00000180899 440 ntBASIC16.23■□□□□ 0.19
Alx4O35137 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Alx4O35137 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx4O35137 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms