Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ndufb11O09111 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ndufb11O09111 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ndufb11O09111 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.7□□□□□ -0.06
Ndufb11O09111 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.7□□□□□ -0.06
Ndufb11O09111 Gm7143-201ENSMUST00000222811 859 ntBASIC14.7□□□□□ -0.06
Ndufb11O09111 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ndufb11O09111 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ndufb11O09111 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndufb11O09111 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ndufb11O09111 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.69□□□□□ -0.06
Ndufb11O09111 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.69□□□□□ -0.06
Ndufb11O09111 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ndufb11O09111 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ndufb11O09111 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndufb11O09111 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ndufb11O09111 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ndufb11O09111 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndufb11O09111 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ndufb11O09111 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.67□□□□□ -0.06
Ndufb11O09111 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndufb11O09111 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ndufb11O09111 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndufb11O09111 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ndufb11O09111 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.65□□□□□ -0.06
Ndufb11O09111 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ndufb11O09111 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.65□□□□□ -0.06
Ndufb11O09111 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ndufb11O09111 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.64□□□□□ -0.07
Ndufb11O09111 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ndufb11O09111 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ndufb11O09111 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ndufb11O09111 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ndufb11O09111 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.64□□□□□ -0.07
Ndufb11O09111 Gm11599-201ENSMUST00000118720 878 ntBASIC14.64□□□□□ -0.07
Ndufb11O09111 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.64□□□□□ -0.07
Ndufb11O09111 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ndufb11O09111 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ndufb11O09111 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms