Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Gm10493-201ENSMUST00000097270 612 ntBASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Fst-202ENSMUST00000223640 2612 ntBASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11bO08712 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11bO08712 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11bO08712 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tnfrsf11bO08712 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf11bO08712 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf11bO08712 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf11bO08712 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Tnfrsf11bO08712 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.52■□□□□ 0.55
Tnfrsf11bO08712 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11bO08712 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Gm6420-201ENSMUST00000193885 723 ntBASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms