Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sgo2bJ3QMK1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sgo2bJ3QMK1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.21■□□□□ 0.5
Sgo2bJ3QMK1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sgo2bJ3QMK1 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sgo2bJ3QMK1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sgo2bJ3QMK1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Gm10849-201ENSMUST00000100397 618 ntBASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Gm26571-201ENSMUST00000181399 666 ntBASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sgo2bJ3QMK1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgo2bJ3QMK1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgo2bJ3QMK1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sgo2bJ3QMK1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sgo2bJ3QMK1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms