Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.76■□□□□ 0.59
Trim55G3X8Y1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim55G3X8Y1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim55G3X8Y1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Gm45444-201ENSMUST00000211394 898 ntBASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim55G3X8Y1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim55G3X8Y1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms