Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Mtag2-201ENSMUST00000058665 714 ntBASIC18.53■□□□□ 0.56
Ccdc149F6V035 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc149F6V035 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc149F6V035 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc149F6V035 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ccdc149F6V035 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.51■□□□□ 0.55
Ccdc149F6V035 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ccdc149F6V035 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.5■□□□□ 0.55
Ccdc149F6V035 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc149F6V035 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc149F6V035 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc149F6V035 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc149F6V035 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
Ccdc149F6V035 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.47■□□□□ 0.55
Ccdc149F6V035 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Gm15375-201ENSMUST00000119510 849 ntBASIC18.47■□□□□ 0.55
Ccdc149F6V035 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc149F6V035 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc149F6V035 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc149F6V035 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc149F6V035 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc149F6V035 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms