Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh17E9PXF0 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh17E9PXF0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh17E9PXF0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh17E9PXF0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Pcdh17E9PXF0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 Gm10698-201ENSMUST00000182663 604 ntBASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh17E9PXF0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Gm13158-201ENSMUST00000122007 736 ntBASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Mir6982-201ENSMUST00000184354 68 ntBASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms