Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28043E0CXC2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28043E0CXC2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gm28043E0CXC2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28043E0CXC2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28043E0CXC2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28043E0CXC2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.27■□□□□ 0.51
Gm28043E0CXC2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28043E0CXC2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28043E0CXC2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gm28043E0CXC2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28043E0CXC2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms