Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Gm12887B1AVM1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm12887B1AVM1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Gm22238-201ENSMUST00000175222 88 ntBASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm12887B1AVM1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm12887B1AVM1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm12887B1AVM1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm12887B1AVM1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Gm7860-201ENSMUST00000121190 879 ntBASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm12887B1AVM1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms