Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC27.15■■□□□ 1.94
Ube2uB1AUC4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube2uB1AUC4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube2uB1AUC4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube2uB1AUC4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube2uB1AUC4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube2uB1AUC4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Gm10812-201ENSMUST00000099864 546 ntBASIC27.14■■□□□ 1.94
Ube2uB1AUC4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ube2uB1AUC4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ube2uB1AUC4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Ube2uB1AUC4 Gm2399-201ENSMUST00000104944 225 ntBASIC27.13■■□□□ 1.93
Ube2uB1AUC4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ube2uB1AUC4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ube2uB1AUC4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ube2uB1AUC4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ube2uB1AUC4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ube2uB1AUC4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Dio3-201ENSMUST00000097228 1449 ntBASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 AC140264.2-202ENSMUST00000218746 817 ntBASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube2uB1AUC4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Gm15847-201ENSMUST00000121417 1065 ntBASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube2uB1AUC4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ube2uB1AUC4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ube2uB1AUC4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC27.07■■□□□ 1.92
Ube2uB1AUC4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube2uB1AUC4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Ube2uB1AUC4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Ube2uB1AUC4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms