Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a5A6H584 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.86□□□□□ -0.19
Col6a5A6H584 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col6a5A6H584 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a5A6H584 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a5A6H584 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a5A6H584 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.86□□□□□ -0.19
Col6a5A6H584 Mir6349-201ENSMUST00000184059 97 ntBASIC13.86□□□□□ -0.19
Col6a5A6H584 Gm7791-201ENSMUST00000219066 539 ntBASIC13.86□□□□□ -0.19
Col6a5A6H584 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a5A6H584 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a5A6H584 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a5A6H584 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a5A6H584 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a5A6H584 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Col6a5A6H584 Gm11594-201ENSMUST00000122313 162 ntBASIC13.84□□□□□ -0.19
Col6a5A6H584 Gm27357-201ENSMUST00000183754 135 ntBASIC13.84□□□□□ -0.19
Col6a5A6H584 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.84□□□□□ -0.19
Col6a5A6H584 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col6a5A6H584 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col6a5A6H584 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col6a5A6H584 Gm43438-201ENSMUST00000198133 379 ntBASIC13.84□□□□□ -0.19
Col6a5A6H584 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a5A6H584 Gm26766-202ENSMUST00000227544 2347 ntBASIC13.83□□□□□ -0.19
Col6a5A6H584 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a5A6H584 Gm11950-201ENSMUST00000121615 838 ntBASIC13.83□□□□□ -0.19
Col6a5A6H584 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a5A6H584 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a5A6H584 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a5A6H584 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.83□□□□□ -0.2
Col6a5A6H584 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a5A6H584 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a5A6H584 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col6a5A6H584 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.83□□□□□ -0.2
Col6a5A6H584 Gm27389-201ENSMUST00000183622 195 ntBASIC13.83□□□□□ -0.2
Col6a5A6H584 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a5A6H584 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a5A6H584 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gm12085-201ENSMUST00000119263 940 ntBASIC13.82□□□□□ -0.2
Col6a5A6H584 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col6a5A6H584 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.82□□□□□ -0.2
Col6a5A6H584 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.82□□□□□ -0.2
Col6a5A6H584 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a5A6H584 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Col6a5A6H584 Olfr129-201ENSMUST00000122318 993 ntBASIC13.81□□□□□ -0.2
Col6a5A6H584 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a5A6H584 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Auts2-212ENSMUST00000178555 309 ntBASIC13.81□□□□□ -0.2
Col6a5A6H584 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a5A6H584 Gm2651-201ENSMUST00000203560 838 ntBASIC13.81□□□□□ -0.2
Col6a5A6H584 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col6a5A6H584 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col6a5A6H584 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a5A6H584 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a5A6H584 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms