Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm10138-203ENSMUST00000206952 366 ntBASIC14.93□□□□□ -0.02
Chd6A3KFM7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Gm27357-201ENSMUST00000183754 135 ntBASIC14.93□□□□□ -0.02
Chd6A3KFM7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.92□□□□□ -0.02
Chd6A3KFM7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.92□□□□□ -0.02
Chd6A3KFM7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.92□□□□□ -0.02
Chd6A3KFM7 Gm27742-201ENSMUST00000184667 60 ntBASIC14.92□□□□□ -0.02
Chd6A3KFM7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.92□□□□□ -0.02
Chd6A3KFM7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.92□□□□□ -0.02
Chd6A3KFM7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chd6A3KFM7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.92□□□□□ -0.02
Chd6A3KFM7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.91□□□□□ -0.02
Chd6A3KFM7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Gm27389-201ENSMUST00000183622 195 ntBASIC14.91□□□□□ -0.02
Chd6A3KFM7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chd6A3KFM7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Gm2651-201ENSMUST00000203560 838 ntBASIC14.9□□□□□ -0.02
Chd6A3KFM7 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.9□□□□□ -0.02
Chd6A3KFM7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Chd6A3KFM7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.89□□□□□ -0.03
Chd6A3KFM7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.89□□□□□ -0.03
Chd6A3KFM7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Gm11950-201ENSMUST00000121615 838 ntBASIC14.89□□□□□ -0.03
Chd6A3KFM7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Gm18195-201ENSMUST00000207604 706 ntBASIC14.89□□□□□ -0.03
Chd6A3KFM7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.89□□□□□ -0.03
Chd6A3KFM7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.88□□□□□ -0.03
Chd6A3KFM7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Gm38027-201ENSMUST00000192315 235 ntBASIC14.88□□□□□ -0.03
Chd6A3KFM7 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.88□□□□□ -0.03
Chd6A3KFM7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd6A3KFM7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.87□□□□□ -0.03
Chd6A3KFM7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.87□□□□□ -0.03
Chd6A3KFM7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.87□□□□□ -0.03
Chd6A3KFM7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms