Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.87■□□□□ 0.93
Ccdc112A0AUP1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc112A0AUP1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc112A0AUP1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc112A0AUP1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc112A0AUP1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc112A0AUP1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc112A0AUP1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc112A0AUP1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc112A0AUP1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc112A0AUP1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc112A0AUP1 Tgds-204ENSMUST00000228543 1594 ntBASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc112A0AUP1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms