Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.32■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.32■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Dio3-201ENSMUST00000097228 1449 ntBASIC19.32■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.32■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.32■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm37856-201ENSMUST00000191634 999 ntBASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm20760-201ENSMUST00000179197 648 ntBASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm27275-201ENSMUST00000184318 272 ntBASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Trmt13-210ENSMUST00000198454 880 ntBASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Flg-201ENSMUST00000050758 1488 ntBASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.28■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Mindy4b-psA0A1W2P7H6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms