Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.32■□□□□ 0.52
Gm3854A0A1B0GSS6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm3854A0A1B0GSS6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3854A0A1B0GSS6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm6433-201ENSMUST00000118634 875 ntBASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Gm3854A0A1B0GSS6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm3854A0A1B0GSS6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm38285-201ENSMUST00000192928 922 ntBASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3854A0A1B0GSS6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3854A0A1B0GSS6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Gm30025-201ENSMUST00000218555 728 ntBASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3854A0A1B0GSS6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3854A0A1B0GSS6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3854A0A1B0GSS6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3854A0A1B0GSS6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3854A0A1B0GSS6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm10231-201ENSMUST00000181584 441 ntBASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm37292-201ENSMUST00000192062 758 ntBASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm10175-202ENSMUST00000208752 441 ntBASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3854A0A1B0GSS6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms