Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trbv13-2A0A140T8N6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv13-2A0A140T8N6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv13-2A0A140T8N6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-2A0A140T8N6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Gm27405-201ENSMUST00000184201 112 ntBASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-2A0A140T8N6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-2A0A140T8N6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-2A0A140T8N6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-2A0A140T8N6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trbv13-2A0A140T8N6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.71□□□□□ -0.38
Trbv13-2A0A140T8N6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-2A0A140T8N6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm6365-201ENSMUST00000054711 744 ntBASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-2A0A140T8N6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm7291-201ENSMUST00000199147 382 ntBASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 301.8 ms