Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Cfap99A0A140LIX9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap99A0A140LIX9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
Cfap99A0A140LIX9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Cfap99A0A140LIX9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Gm44549-201ENSMUST00000208351 577 ntBASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.77■■□□□ 1.08
Cfap99A0A140LIX9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cfap99A0A140LIX9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.77■■□□□ 1.07
Cfap99A0A140LIX9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Gm18666-201ENSMUST00000190039 958 ntBASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap99A0A140LIX9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Gm13836-201ENSMUST00000121159 501 ntBASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap99A0A140LIX9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms