Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn2aA0A0J9YTW6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Trmt13-210ENSMUST00000198454 880 ntBASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.81■□□□□ 0.28
Scn2aA0A0J9YTW6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scn2aA0A0J9YTW6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2aA0A0J9YTW6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2aA0A0J9YTW6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2aA0A0J9YTW6 Gm5643-201ENSMUST00000117081 966 ntBASIC16.77■□□□□ 0.28
Scn2aA0A0J9YTW6 Gm2559-201ENSMUST00000201323 363 ntBASIC16.77■□□□□ 0.28
Scn2aA0A0J9YTW6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2aA0A0J9YTW6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2aA0A0J9YTW6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2aA0A0J9YTW6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm20760-201ENSMUST00000179197 648 ntBASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm27275-201ENSMUST00000184318 272 ntBASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2aA0A0J9YTW6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 BC021767-201ENSMUST00000126387 1716 ntBASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2aA0A0J9YTW6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm13168-201ENSMUST00000121771 632 ntBASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2aA0A0J9YTW6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms