Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Mir7075-201ENSMUST00000184187 82 ntBASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Smad6-203ENSMUST00000179458 273 ntBASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13d-4A0A0G2JFX3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms