Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Nespas-201ENSMUST00000143738 1083 ntBASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav9n-2A0A0G2JDP3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gm10033-202ENSMUST00000211874 928 ntBASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gm6420-201ENSMUST00000193885 723 ntBASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gm7514-201ENSMUST00000209475 934 ntBASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-2A0A0G2JDP3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms