Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Gm27801-201ENSMUST00000184174 223 ntBASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav19A0A0B4J1K4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav19A0A0B4J1K4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Gm9847-201ENSMUST00000052528 599 ntBASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav19A0A0B4J1K4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trav19A0A0B4J1K4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms