Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv20A0A0B4J1H5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.36■□□□□ 0.21
Trbv20A0A0B4J1H5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv20A0A0B4J1H5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv20A0A0B4J1H5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv20A0A0B4J1H5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv20A0A0B4J1H5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv20A0A0B4J1H5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv20A0A0B4J1H5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv20A0A0B4J1H5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv20A0A0B4J1H5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv20A0A0B4J1H5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms