Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm5921-201ENSMUST00000075898 882 ntBASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tgds-204ENSMUST00000228543 1594 ntBASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms