Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv5A0A0B4J1G9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
Trbv5A0A0B4J1G9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Trbv5A0A0B4J1G9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv5A0A0B4J1G9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv5A0A0B4J1G9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv5A0A0B4J1G9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv5A0A0B4J1G9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv5A0A0B4J1G9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv5A0A0B4J1G9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms