Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Gm43017-201ENSMUST00000198296 752 ntBASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BC053393A0A0B4J1F6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BC053393A0A0B4J1F6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BC053393A0A0B4J1F6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BC053393A0A0B4J1F6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BC053393A0A0B4J1F6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BC053393A0A0B4J1F6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BC053393A0A0B4J1F6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BC053393A0A0B4J1F6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BC053393A0A0B4J1F6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Gm8969-201ENSMUST00000199694 526 ntBASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.57□□□□□ -0.08
BC053393A0A0B4J1F6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BC053393A0A0B4J1F6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms