Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Fst-202ENSMUST00000223640 2612 ntBASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gm12821-201ENSMUST00000120022 600 ntBASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sirpb1aA0A0A6YYP6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1aA0A0A6YYP6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sirpb1aA0A0A6YYP6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.26■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sirpb1aA0A0A6YYP6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms