Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm37055-201ENSMUST00000191866 133 ntBASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm18025-201ENSMUST00000221733 862 ntBASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-42A0A0A6YY38 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Mir6349-201ENSMUST00000184059 97 ntBASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm43183-201ENSMUST00000200632 547 ntBASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-42A0A0A6YY38 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ighv1-42A0A0A6YY38 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Mir5122-201ENSMUST00000175004 89 ntBASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.84■□□□□ 0.29
Ighv1-42A0A0A6YY38 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Ighv1-42A0A0A6YY38 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm42545-201ENSMUST00000202755 922 ntBASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms