Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trbc1A0A0A6YWV4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbc1A0A0A6YWV4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trbc1A0A0A6YWV4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbc1A0A0A6YWV4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbc1A0A0A6YWV4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbc1A0A0A6YWV4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbc1A0A0A6YWV4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbc1A0A0A6YWV4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbc1A0A0A6YWV4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbc1A0A0A6YWV4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Gm5408-201ENSMUST00000197998 747 ntBASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbc1A0A0A6YWV4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbc1A0A0A6YWV4 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbc1A0A0A6YWV4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms