Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-4A0A075B654 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Trav3-4A0A075B654 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav3-4A0A075B654 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav3-4A0A075B654 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-4A0A075B654 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.32□□□□□ -0.44
Trav3-4A0A075B654 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-4A0A075B654 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-4A0A075B654 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms