Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm9847-201ENSMUST00000052528 599 ntBASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms