Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav13-1A0A075B644 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-1A0A075B644 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-1A0A075B644 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav13-1A0A075B644 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-1A0A075B644 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-1A0A075B644 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-1A0A075B644 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-1A0A075B644 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-1A0A075B644 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-1A0A075B644 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-1A0A075B644 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms