Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav8-1A0A075B641 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Gm7143-201ENSMUST00000222811 859 ntBASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav8-1A0A075B641 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav8-1A0A075B641 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav8-1A0A075B641 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms