Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4d-3A0A075B625 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav4d-3A0A075B625 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4d-3A0A075B625 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav4d-3A0A075B625 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4d-3A0A075B625 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms