Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-6A0A075B603 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-6A0A075B603 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-6A0A075B603 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-6A0A075B603 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-6A0A075B603 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-6A0A075B603 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-6A0A075B603 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-6A0A075B603 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms