Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm23485-201ENSMUST00000104181 155 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm25344-201ENSMUST00000104503 132 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm14870-201ENSMUST00000118414 156 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm11689-201ENSMUST00000120766 302 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm23762-201ENSMUST00000158348 106 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm20432-201ENSMUST00000173716 250 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm25617-201ENSMUST00000179548 133 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm27185-201ENSMUST00000184296 247 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm28846-201ENSMUST00000189161 368 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm37620-201ENSMUST00000192910 501 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm25617-202ENSMUST00000198387 132 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm12135-201ENSMUST00000119170 466 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm15149-201ENSMUST00000119370 360 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm7746-201ENSMUST00000120966 503 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm12778-201ENSMUST00000122341 333 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm11962-201ENSMUST00000145746 255 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm43160-201ENSMUST00000196453 421 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm43377-201ENSMUST00000201640 455 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm17849-201ENSMUST00000219788 853 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm2754-201ENSMUST00000223383 589 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Upk3aQ9JKX8 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Upk3aQ9JKX8 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.5□□□□□ -1.37
Upk3aQ9JKX8 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Upk3aQ9JKX8 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms