Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.16□□□□□ -1.26
Rpa3Q9CQ71 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Mir708-201ENSMUST00000102189 109 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm13735-201ENSMUST00000120217 670 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm12535-201ENSMUST00000121025 484 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm8715-201ENSMUST00000162728 531 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm24157-201ENSMUST00000175265 111 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm27360-201ENSMUST00000183487 80 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm36965-201ENSMUST00000193797 394 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm46203-201ENSMUST00000218130 478 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 A1cf-203ENSMUST00000224400 1204 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm6887-201ENSMUST00000080945 482 ntBASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Rpa3Q9CQ71 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.15□□□□□ -1.27
Rpa3Q9CQ71 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm6142-201ENSMUST00000120290 325 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm14796-201ENSMUST00000121216 959 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm13462-201ENSMUST00000121472 961 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm6726-201ENSMUST00000172786 681 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm29383-201ENSMUST00000188284 480 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm5711-201ENSMUST00000197896 421 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm36448-201ENSMUST00000199916 438 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm6681-201ENSMUST00000205215 607 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm4585-201ENSMUST00000207218 452 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 AC134913.1-201ENSMUST00000224563 504 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rpa3Q9CQ71 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 277.3 ms