Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm42431-201ENSMUST00000196880 323 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm45196-201ENSMUST00000206751 825 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm45628-201ENSMUST00000210849 274 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc9Q8VC31 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm45311-201ENSMUST00000211086 1330 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm26469-201ENSMUST00000116765 121 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm16418-201ENSMUST00000118577 171 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm12993-201ENSMUST00000119900 479 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm16260-201ENSMUST00000155141 304 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm22224-201ENSMUST00000157357 93 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm6799-201ENSMUST00000186919 573 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Stk-ps2-204ENSMUST00000187808 616 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm29739-201ENSMUST00000191760 529 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm17970-201ENSMUST00000192199 685 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm37339-201ENSMUST00000194142 392 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm7631-201ENSMUST00000196935 1100 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm44285-201ENSMUST00000203557 940 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm18192-201ENSMUST00000210174 941 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm45283-201ENSMUST00000210593 628 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm18378-201ENSMUST00000216245 628 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm24143-201ENSMUST00000082633 145 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm44193-201ENSMUST00000204822 2523 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm37769-201ENSMUST00000193753 2369 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.15□□□□□ -1.1
Ccdc9Q8VC31 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 AC152944.1-201ENSMUST00000220160 3101 ntBASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc9Q8VC31 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Mir708-201ENSMUST00000102189 109 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms