Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Mir678-201ENSMUST00000102114 84 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm13486-201ENSMUST00000119910 282 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm15538-201ENSMUST00000121410 313 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm22885-201ENSMUST00000157410 107 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm23762-201ENSMUST00000158348 106 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm27507-201ENSMUST00000184199 93 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm29470-201ENSMUST00000188007 696 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm34144-201ENSMUST00000197039 259 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm19764-201ENSMUST00000203630 649 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm32899-201ENSMUST00000219694 207 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Diaph3-204ENSMUST00000226254 682 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Rfx6Q8C7R7 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm22774-201ENSMUST00000102084 109 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm13798-201ENSMUST00000118285 139 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm13222-201ENSMUST00000119638 138 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm12459-201ENSMUST00000120659 356 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm9697-201ENSMUST00000147052 997 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm3121-201ENSMUST00000187086 406 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm28573-201ENSMUST00000187821 380 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm28145-201ENSMUST00000189742 380 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm28400-201ENSMUST00000191332 380 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.84□□□□□ -1.31
Rfx6Q8C7R7 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms