Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AU015228-201ENSMUST00000121103 1320 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Orai2-202ENSMUST00000196454 3990 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 A930005G22Rik-201ENSMUST00000201293 1904 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Ezh2-202ENSMUST00000092648 2115 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm11346-203ENSMUST00000135889 2832 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 A030012G06Rik-201ENSMUST00000192385 1880 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Rbm43-206ENSMUST00000165313 1975 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Trim35Q8C006 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm11191-201ENSMUST00000117231 610 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm7781-201ENSMUST00000117258 788 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm14323-201ENSMUST00000122418 627 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm27254-201ENSMUST00000183926 517 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm6073-201ENSMUST00000198253 466 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm44571-201ENSMUST00000208092 533 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC9.58□□□□□ -0.88
Trim35Q8C006 AC123665.6-201ENSMUST00000228568 538 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm25973-201ENSMUST00000083717 127 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm9386-201ENSMUST00000095195 381 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm15550-201ENSMUST00000120824 1748 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm43820-201ENSMUST00000199414 3346 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 1600029O15Rik-202ENSMUST00000179787 1809 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm37663-201ENSMUST00000191887 2299 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Ect2l-203ENSMUST00000207827 2730 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Dpysl2-201ENSMUST00000022629 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Gm37238-201ENSMUST00000195552 2390 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 AC121286.2-201ENSMUST00000218069 2470 ntBASIC9.58□□□□□ -0.88
Trim35Q8C006 Pkib-201ENSMUST00000066028 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Epb41-205ENSMUST00000105972 2577 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim35Q8C006 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim35Q8C006 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Itgbl1-201ENSMUST00000049681 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gsdmc2-201ENSMUST00000089900 1981 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm17473-202ENSMUST00000228544 2071 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm14139-201ENSMUST00000109926 1728 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Sytl3-205ENSMUST00000160483 1720 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Cpsf3-201ENSMUST00000067284 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm19131-202ENSMUST00000203464 3208 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 CT030170.3-201ENSMUST00000221205 1815 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm13700-201ENSMUST00000118624 1128 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm9097-201ENSMUST00000120514 880 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm11965-201ENSMUST00000122017 277 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Commd2-202ENSMUST00000160959 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm18513-201ENSMUST00000177313 560 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm7784-201ENSMUST00000180769 989 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm16470-201ENSMUST00000182456 998 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Mir6413-201ENSMUST00000184049 108 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm28381-201ENSMUST00000188403 193 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm7871-201ENSMUST00000195346 618 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Igkv3-11-201ENSMUST00000197500 385 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim35Q8C006 AC151971.6-201ENSMUST00000216193 866 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms