Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 AC157017.1-201ENSMUST00000220148 364 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 AC163651.1-201ENSMUST00000222500 372 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 CT010472.1-201ENSMUST00000224000 704 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Clcn1Q64347 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC9.88□□□□□ -0.83
Clcn1Q64347 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.88□□□□□ -0.83
Clcn1Q64347 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.88□□□□□ -0.83
Clcn1Q64347 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Clcn1Q64347 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Clcn1Q64347 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Clcn1Q64347 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Clcn1Q64347 AC166159.1-201ENSMUST00000227154 1380 ntBASIC9.88□□□□□ -0.83
Clcn1Q64347 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm38374-201ENSMUST00000194417 2033 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm6913-201ENSMUST00000100019 348 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm22470-201ENSMUST00000104117 130 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm15047-201ENSMUST00000118891 454 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm22636-201ENSMUST00000158142 275 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm6434-201ENSMUST00000163316 372 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Mir3085-201ENSMUST00000175493 89 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm18415-201ENSMUST00000177464 647 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm7763-201ENSMUST00000182220 1006 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm27542-201ENSMUST00000184184 256 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm17895-201ENSMUST00000194028 874 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm44404-201ENSMUST00000203979 636 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm44940-201ENSMUST00000206225 1247 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm7419-201ENSMUST00000209962 925 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm40853-201ENSMUST00000221342 582 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm9255-201ENSMUST00000223225 581 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 AC121542.2-201ENSMUST00000227529 400 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm10601-201ENSMUST00000120436 1422 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clcn1Q64347 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Gm36938-201ENSMUST00000191612 2696 ntBASIC9.87□□□□□ -0.83
Clcn1Q64347 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clcn1Q64347 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Clcn1Q64347 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Clcn1Q64347 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Clcn1Q64347 AC159301.1-202ENSMUST00000225860 2133 ntBASIC9.86□□□□□ -0.83
Clcn1Q64347 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC9.86□□□□□ -0.83
Clcn1Q64347 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Clcn1Q64347 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Clcn1Q64347 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clcn1Q64347 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms