Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm12967-201ENSMUST00000122147 289 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm23426-201ENSMUST00000122483 318 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm24994-201ENSMUST00000157414 121 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm19840-201ENSMUST00000169624 882 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.09□□□□□ -1.27
Msx2Q03358 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm26977-201ENSMUST00000183151 996 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm8167-201ENSMUST00000183320 958 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm38061-201ENSMUST00000192490 365 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm35108-201ENSMUST00000194321 699 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm33191-201ENSMUST00000195604 699 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm43310-201ENSMUST00000198975 820 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm43884-201ENSMUST00000204251 559 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.09□□□□□ -1.27
Msx2Q03358 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm44919-201ENSMUST00000208587 1073 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm33778-201ENSMUST00000216884 704 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 AC142114.1-201ENSMUST00000227724 328 ntBASIC7.09□□□□□ -1.27
Msx2Q03358 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Msx2Q03358 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Msx2Q03358 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Msx2Q03358 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Msx2Q03358 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Msx2Q03358 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Msx2Q03358 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Msx2Q03358 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Msx2Q03358 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Msx2Q03358 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.09□□□□□ -1.28
Msx2Q03358 Gm42905-201ENSMUST00000196237 1611 ntBASIC7.09□□□□□ -1.28
Msx2Q03358 BC055308-201ENSMUST00000193380 2538 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Msx2Q03358 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm22900-201ENSMUST00000104538 130 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Msx2Q03358 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm24195-201ENSMUST00000116804 137 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gm12598-201ENSMUST00000117333 830 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gm4910-201ENSMUST00000119605 366 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Mup-ps13-201ENSMUST00000120662 545 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Mup-ps1-201ENSMUST00000120720 544 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm24039-201ENSMUST00000157878 132 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC7.08□□□□□ -1.28
Msx2Q03358 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm8993-201ENSMUST00000182182 983 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Mir6912-201ENSMUST00000184456 70 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.08□□□□□ -1.28
Msx2Q03358 Mir8097-201ENSMUST00000185150 119 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm28113-201ENSMUST00000188280 229 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC7.08□□□□□ -1.28
Msx2Q03358 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC7.08□□□□□ -1.28
Msx2Q03358 Gm37371-201ENSMUST00000194837 392 ntBASIC7.08□□□□□ -1.28
Msx2Q03358 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Msx2Q03358 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms