Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm45528-201ENSMUST00000209854 3145 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm26340-201ENSMUST00000102365 99 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm22267-201ENSMUST00000104008 131 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Snord88a-201ENSMUST00000116723 90 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm12920-201ENSMUST00000121818 1186 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm24176-201ENSMUST00000158928 121 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm19840-201ENSMUST00000169624 882 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm27018-201ENSMUST00000181136 225 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm44471-201ENSMUST00000197963 100 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm43033-201ENSMUST00000199682 425 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm20223-201ENSMUST00000199932 805 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm43459-201ENSMUST00000202093 331 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm7252-201ENSMUST00000223284 456 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Gm43123-201ENSMUST00000201893 3471 ntBASIC5.97□□□□□ -1.45
Nkx3-1P97436 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Nkx3-1P97436 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nkx3-1P97436 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nkx3-1P97436 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nkx3-1P97436 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nkx3-1P97436 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Nkx3-1P97436 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
Nkx3-1P97436 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Nkx3-1P97436 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.96□□□□□ -1.45
Nkx3-1P97436 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm23979-201ENSMUST00000104071 128 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm25785-201ENSMUST00000104129 125 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm15186-201ENSMUST00000119345 563 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm13237-201ENSMUST00000122151 635 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms