Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm23385-201ENSMUST00000158592 295 ntBASIC7.72□□□□□ -1.17
Sox1P53783 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Mir5617-201ENSMUST00000176786 57 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm18588-201ENSMUST00000177308 492 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm23287-201ENSMUST00000179427 116 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm23143-201ENSMUST00000180137 116 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm6445-201ENSMUST00000189515 1112 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm38068-201ENSMUST00000192546 540 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm42824-201ENSMUST00000199361 247 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm4859-201ENSMUST00000199625 787 ntBASIC7.72□□□□□ -1.17
Sox1P53783 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.72□□□□□ -1.17
Sox1P53783 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Gm9357-201ENSMUST00000207138 805 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm4083-201ENSMUST00000207158 451 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.72□□□□□ -1.17
Sox1P53783 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.72□□□□□ -1.17
Sox1P53783 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.72□□□□□ -1.17
Sox1P53783 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Sox1P53783 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm24871-201ENSMUST00000083099 116 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm26264-201ENSMUST00000083278 159 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm25099-201ENSMUST00000093716 116 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Rnu5g-201ENSMUST00000093721 116 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm17821-201ENSMUST00000223448 1693 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.72□□□□□ -1.17
Sox1P53783 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox1P53783 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox1P53783 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Sox1P53783 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Gm17101-201ENSMUST00000169520 1588 ntBASIC7.71□□□□□ -1.17
Sox1P53783 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Sox1P53783 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Sox1P53783 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC7.71□□□□□ -1.17
Sox1P53783 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox1P53783 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Sox1P53783 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Sox1P53783 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Sox1P53783 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Sox1P53783 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Sox1P53783 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.71□□□□□ -1.18
Sox1P53783 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm8421-201ENSMUST00000119439 305 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm24687-201ENSMUST00000157758 241 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Gm23082-201ENSMUST00000157852 133 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Gm17137-202ENSMUST00000165729 957 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm8151-201ENSMUST00000184817 871 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.71□□□□□ -1.18
Sox1P53783 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms