Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Mir199b-201ENSMUST00000175066 110 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm38373-201ENSMUST00000192042 288 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm43762-201ENSMUST00000201521 295 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Zfp850-201ENSMUST00000099111 941 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 CT030185.2-201ENSMUST00000222614 1310 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Robo2-210ENSMUST00000226478 8059 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usf3B2RUQ2 Gm22774-201ENSMUST00000102084 109 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm25379-201ENSMUST00000104338 114 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm12518-201ENSMUST00000122075 779 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm12833-201ENSMUST00000136112 477 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm17212-201ENSMUST00000166666 259 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm36965-201ENSMUST00000193797 394 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC124184.1-201ENSMUST00000218167 283 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm14762-201ENSMUST00000105109 1771 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm36933-201ENSMUST00000194945 3071 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm14893-201ENSMUST00000117904 282 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm11445-201ENSMUST00000119101 532 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm14375-201ENSMUST00000119490 855 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm15081-201ENSMUST00000119794 844 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm16284-201ENSMUST00000140995 400 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm6726-201ENSMUST00000172786 681 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm5871-201ENSMUST00000176461 718 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Mir6241-201ENSMUST00000184225 103 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm29141-201ENSMUST00000190357 882 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm37439-201ENSMUST00000193150 856 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm6776-201ENSMUST00000057752 900 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 AC171003.1-201ENSMUST00000221667 1665 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Gm44553-201ENSMUST00000206316 2037 ntBASIC5.72□□□□□ -1.49
Usf3B2RUQ2 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Usf3B2RUQ2 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.71□□□□□ -1.49
Usf3B2RUQ2 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms