Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm15349-201ENSMUST00000121154 204 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm5166-201ENSMUST00000121332 573 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm20691-201ENSMUST00000176889 333 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Mir7058-201ENSMUST00000184637 75 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm28117-201ENSMUST00000188472 371 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm31711-201ENSMUST00000220687 196 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm24621-201ENSMUST00000082679 140 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm13983-201ENSMUST00000118018 865 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm11501-201ENSMUST00000118039 581 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm13265-201ENSMUST00000118090 421 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm8534-201ENSMUST00000118553 766 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm13222-201ENSMUST00000119638 138 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm11553-201ENSMUST00000120682 240 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm25281-201ENSMUST00000157270 104 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm24781-201ENSMUST00000157636 117 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm6434-201ENSMUST00000163316 372 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm18781-201ENSMUST00000211252 924 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Mir106b-201ENSMUST00000083580 82 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upk3aQ9JKX8 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
Upk3aQ9JKX8 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Upk3aQ9JKX8 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms